Props to Ken Dao for giving a poster presentation as an undergrad at the ASH Annual Meeting 2024 and ORIEN 2024 titled "Inflammatory Transcriptional Signature Can Discriminate De Novo and Secondary AML." Here's a video of Ken interviewed by Moffitt News. Well done! 12/6/2024
New Pub! Tim and Dr Vicky Leventaki published in Leukemia on the genomic analysis of pediatric ALCL. It was a fruitful collaboration with colleagues from St Jude and MD Anderson. 11/26/2024
Props to Dr Tomas Zelenka on receiving the ACS Postdoctoral Fellowship under the guidance of Dr Dorina Avram. Tim will provide guidance on bioinformatics analysis. Congrats! 11/22/2024.
Props to Alyssa Obermayer for giving an oral presentation at the Biological Data Science CSHL Meeting titled "Analysis of clonal heterogeneity within paired primary and metastatic tumor samples of patients with solid tumors and implications for neoantigen-based personalized cancer vaccines." Well done! 11/13/2024.
Congrats to Josh Davis and Alyssa Obermayer's publication in the journal of Bioinformatics titled "BatchFLEX: feature-level equalization of X-batch." The tool can be accessed on shiny io here.
Dr Barbara Cruz visited our lab and the Bio2 ODSi group. She's USF professor and is a Moffitt Patient Advisor, Patient and Family Advisory Council. Her talk "Moffitt's Total Cancer Care: A Patient's Perspective" was inspiring to us all to work hard to facilitate translation. 8/26/2024
Enjoyed Top golf with the interns from the Bio2 Department. Thanks to all from Shaw and Soupir Lab who came out. 7/17/2024
New Pub! Tim and St Jude colleagues published in Nature Comm on utilizing exons as CAR T targets in pediatric cancers. 5/3/2024
Props to Alyssa Obermayer for giving an oral presentation at the AACR Annual Meeting 2024 minisymposium titled "Analysis of clonal heterogeneity within paired primary and metastatic tumor samples of patiens with solid tumors and implications for neoantigen-based personalized cancer vaccines. 4/15/2024
Props to Dr. Joshua Davis for giving a poster presentation at the AACR Annual Meeting 2024 titled "BATCH-FLEX: Feature-level equalization of x-batch in heterogeneous cancer data." 4/15/2024
Congrats to ChingYao (Kent) Yang on getting a job at Emory. Good luck Kent! 4/1/2024
2023 Photos
2023 News
Congrats to Gabrielle Nobles getting accepted to the Bioinformatics PhD program @ Baylor. Super proud of you and good luck!
Congrats to Alyssa Obermayer for winning both the best analytical tool and the best visualization of the year during the annual BBSR Annual award.
Tim gave a talk @ the ORIEN Annual Meeting at Huntsman Cancer Center. Thanks to the ORIEN organizing committee for the invitation.
Tim presented at ASCO and was interviewed by OncLive and Moffitt News for their work titled "Genetic heterogeneity between paired primary & metastatic solid tumors & implications for neoantigen-based personalized cancer vaccines."
Congrats to Alyssa Obermayer, Darwin Chang, Gabrielle Nobles, and colleagues for publishing PATH-SURVEYOR in BMC Bioinformatics. The tool is available on Shiny IO here.
Props to Alyssa Obermayer for presenting at AMIA - way to go!
The Shaw lab received their first external grant from Live Like Bella to tackle pediatric AML by targeting ER stress.
2021-2022 Photos
2021-2022 News
The Shaw lab received the American Cancer Society Institutional Research Grant award to tackle clear cell renal cell carcinoma by exploring genetic lesions that impact ER stress. 7/1/2022
Congrats to our close collaborator Dr Paulo Rodriguez's publication in Cancer Cell titled "Ablation of the endoplasmic reticulum stress kinase PERK induces paraptosis and type I interferon to promote anti-tumor T cell responses." 10/2022.
Farewell to Dr Thushara Madayanake, you've been a create colleague and teacher of the bench. 11/2022
Congrats to Alyssa Obermayer on the publication in Biology on a simple tool for expression analysis. The tool is available on Shiny IO Here. 2/8/2022
We welcome the first lab member, Alyssa Obermayer, who recently graduated from USF Masters in Bioinformatics, she joins the team as a bioinformatics analyst. 8/2021
We have our first bioinformatics interns, William Namm and Michael Golden. 8/1/2021.
Tim Shaw and colleagues published a review paper in Frontiers in Oncology titled "Multi-omics approach to identifying isoform variants as therapeutic targets in cancer patients." 11/24/2022
The Shaw lab received its first internal pilot grant from the Bio2 department to develop a pipeline for alternative splicing analysis. 7/1/2021
